Top cofit genes for MMP_RS04425 from Methanococcus maripaludis S2

APC family permease
SEED: Amino acid permease family protein
KEGG: basic amino acid/polyamine antiporter, APA family

Rank	Hit	Name	Description	Conserved?	Cofitness
1	MMP_RS05065		CooT family nickel-binding protein	no	0.58
2	MMP_RS05070		4Fe-4S dicluster domain-containing protein	no	0.57
3	MMP_RS05080		acetyl-CoA decarbonylase/synthase complex subunit delta	no	0.56
4	MMP_RS05055		DUF166 domain-containing protein	no	0.56
5	MMP_RS05075		acetyl-CoA decarbonylase/synthase complex subunit gamma	no	0.55
6	MMP_RS05100		CO dehydrogenase/acetyl-CoA synthase complex subunit alpha	no	0.55
7	MMP_RS05060		AAA family ATPase	no	0.55
8	MMP_RS05090		CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta	no	0.55
9	MMP_RS08240		methanogenesis marker 16 metalloprotein	no	0.54
10	MMP_RS05085		AAA family ATPase	no	0.54
11	MMP_RS05095		CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon	no	0.51
12	MMP_RS01455		nickel pincer cofactor biosynthesis protein LarC	0.36	0.49
13	MMP_RS06375		ATP-dependent sacrificial sulfur transferase LarE	no	0.47
14	MMP_RS04215		nickel pincer cofactor biosynthesis protein LarB	no	0.47
15	MMP_RS07720		4Fe-4S binding protein	no	0.44
16	MMP_RS03420		acetolactate synthase small subunit	0.62	0.44
17	MMP_RS05500		2-isopropylmalate synthase	0.58	0.44
18	MMP_RS03450		glycine synthesis protein GlyXS (from data)	no	0.44
19	MMP_RS04620		cobalt transporter CbiM	no	0.44
20	MMP_RS01475		phosphosulfolactate synthase	no	0.44

Or look for negative cofitness