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Cofit
Protein
Homologs
Top cofit genes for MMP_RS04025 from
Methanococcus maripaludis S2
ATPase AAA
SEED: predicted ATPase, AAA superfamily
Rank
Hit
Name
Description
Conserved?
Cofitness
1
MMP
_RS04995
hypothetical protein
no
0.26
2
MMP
_RS05985
hypothetical protein
no
0.24
3
MMP
_RS01570
hypothetical protein
no
0.23
4
MMP
_RS04825
protein-glutamate O-methyltransferase CheR
no
0.22
5
MMP
_RS08410
DUF169 domain-containing protein
no
0.22
6
MMP
_RS08670
metallophosphoesterase
no
0.22
7
MMP
_RS01630
N-glycosylase/DNA lyase
no
0.22
8
MMP
_RS06140
radical SAM protein
no
0.21
9
MMP
_RS02295
TatD family hydrolase
no
0.21
10
MMP
_RS01770
ATP-dependent endonuclease
no
0.20
11
MMP
_RS01790
restriction endonuclease
no
0.20
12
MMP
_RS00130
nickel-responsive transcriptional regulator NikR
no
0.19
13
MMP
_RS02760
COG1361 S-layer family protein
no
0.19
14
MMP
_RS04030
hypothetical protein
no
0.19
15
MMP
_RS02385
ATP-binding protein
no
0.19
16
MMP
_RS00475
Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain
no
0.18
17
MMP
_RS03745
phenylacetate--CoA ligase
no
0.18
18
MMP
_RS00690
MBL fold metallo-hydrolase
no
0.18
19
MMP
_RS02555
AIPR family protein
no
0.18
20
MMP
_RS00570
protein-L-isoaspartate O-methyltransferase
no
0.18
Or look for
negative cofitness