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Cofit
Protein
Homologs
Top cofit genes for MMP_RS03950 from
Methanococcus maripaludis S2
HNH endonuclease
SEED: HNH endonuclease:HNH nuclease
Rank
Hit
Name
Description
Conserved?
Cofitness
1
MMP
_RS05635
NAD-dependent epimerase/dehydratase family protein
no
0.24
2
MMP
_RS01270
prepilin peptidase
no
0.24
3
MMP
_RS06035
glycosyltransferase family 2 protein
no
0.24
4
MMP
_RS01295
hypothetical protein
no
0.23
5
MMP
_RS01310
hypothetical protein
no
0.22
6
MMP
_RS07330
membrane protein
no
0.22
7
MMP
_RS01315
DUF2341 domain-containing protein
no
0.22
8
MMP
_RS08675
class III signal peptide-containing protein
no
0.22
9
MMP
_RS01280
DUF515 domain-containing protein
no
0.22
10
MMP
_RS01275
class III signal peptide-containing protein
no
0.22
11
MMP
_RS01290
class III signal peptide-containing protein
no
0.21
12
MMP
_RS01305
hypothetical protein
no
0.21
13
MMP
_RS00245
type II secretion system F family protein
no
0.21
14
MMP
_RS00250
Flp pilus assembly complex ATPase component TadA
no
0.21
15
MMP
_RS01285
hypothetical protein
no
0.21
16
MMP
_RS05580
glycosyltransferase
no
0.20
17
MMP
_RS00240
type II secretion system F family protein
no
0.20
18
MMP
_RS02545
hypothetical protein
no
0.20
19
MMP
_RS00640
ABC transporter substrate-binding protein
no
0.20
20
MMP
_RS01495
TraB/GumN family protein
no
0.19
Or look for
negative cofitness