Top cofit genes for MMP_RS03885 from Methanococcus maripaludis S2

tyrosine-type recombinase/integrase
SEED: Probable integrase/recombinase
KEGG: integrase/recombinase XerD

Rank	Hit	Name	Description	Conserved?	Cofitness
1	MMP_RS04800		chemotaxis protein CheW	no	0.37
2	MMP_RS04115		cytosine permease	no	0.36
3	MMP_RS00650		ABC transporter ATP-binding protein	no	0.35
4	MMP_RS00085		DNA cytosine methyltransferase	no	0.33
5	MMP_RS01160		DMT family transporter	no	0.32
6	MMP_RS05110		16S ribosomal RNA methyltransferase A	no	0.32
7	MMP_RS01210		sodium:solute symporter	no	0.31
8	MMP_RS00280		DUF2118 domain-containing protein	no	0.31
9	MMP_RS06075		class I SAM-dependent methyltransferase	no	0.31
10	MMP_RS01930		hypothetical protein	no	0.30
11	MMP_RS03480		SulP family inorganic anion transporter	0.64	0.30
12	MMP_RS06150		hypothetical protein	no	0.29
13	MMP_RS04635		GNAT family N-acetyltransferase	no	0.29
14	MMP_RS02375		hypothetical protein	no	0.29
15	MMP_RS00855		DUF367 family protein	no	0.29
16	MMP_RS00940		daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein	no	0.29
17	MMP_RS08445		DUF2099 family protein	no	0.28
18	MMP_RS08310		TMEM165/GDT1 family protein	no	0.28
19	MMP_RS02300		NAD(P)H-dependent oxidoreductase	no	0.28
20	MMP_RS00155		heavy metal-binding domain-containing protein	no	0.28

Or look for negative cofitness