Top cofit genes for MMP_RS03815 from Methanococcus maripaludis S2

excinuclease ABC subunit UvrA
SEED: Excinuclease ABC subunit A
KEGG: excinuclease ABC subunit A

Rank	Hit	Name	Description	Conserved?	Cofitness
1	MMP_RS05295		minichromosome maintenance protein MCM	0.60	0.42
2	MMP_RS06725		hypothetical protein	no	0.42
3	MMP_RS04955		DNA topoisomerase I	no	0.41
4	MMP_RS00040		TIGR03576 family pyridoxal phosphate-dependent enzyme	no	0.39
5	MMP_RS04245		right-handed parallel beta-helix repeat-containing protein	no	0.38
6	MMP_RS04975		hypothetical protein	no	0.35
7	MMP_RS03680		hypothetical protein	no	0.35
8	MMP_RS04155		MFS transporter	no	0.35
9	MMP_RS03560		Na+/H+ antiporter NhaC family protein	no	0.34
10	MMP_RS02930		class I SAM-dependent methyltransferase	no	0.34
11	MMP_RS05580		glycosyltransferase	no	0.34
12	MMP_RS08855		hypothetical protein	no	0.34
13	MMP_RS07180		DEAD/DEAH box helicase	no	0.33
14	MMP_RS00140		DUF192 domain-containing protein	no	0.33
15	MMP_RS00730		5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB	no	0.33
16	MMP_RS07695		DUF3236 domain-containing protein	0.61	0.33
17	MMP_RS03005		S-layer protein	no	0.32
18	MMP_RS01085		hypothetical protein	no	0.32
19	MMP_RS06395		ThiF family adenylyltransferase	no	0.32
20	MMP_RS05325		hypothetical protein	no	0.32

Or look for negative cofitness