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  • Top cofit genes for MMP_RS03810 from Methanococcus maripaludis S2

    excinuclease ABC subunit UvrC
    SEED: Excinuclease ABC subunit C
    KEGG: excinuclease ABC subunit C

    Rank Hit Name Description Conserved? Cofitness  
    1 MMP_RS04625 DEAD/DEAH box helicase no 0.32
    2 MMP_RS08690 RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5 no 0.28
    3 MMP_RS05540 hypothetical protein no 0.28
    4 MMP_RS02800 nucleotidyltransferase domain-containing protein no 0.28
    5 MMP_RS04110 methyl-accepting chemotaxis protein no 0.27
    6 MMP_RS00720 metal-dependent hydrolase no 0.27
    7 MMP_RS08720 4Fe-4S binding protein no 0.26
    8 MMP_RS02355 30S ribosomal protein S27ae no 0.26
    9 MMP_RS03815 excinuclease ABC subunit UvrA 0.99 0.26
    10 MMP_RS07180 DEAD/DEAH box helicase no 0.26
    11 MMP_RS07525 4Fe-4S binding protein no 0.25
    12 MMP_RS08790 translation initiation factor IF-2 subunit alpha no 0.25
    13 MMP_RS02340 DNA-directed RNA polymerase subunit E'' no 0.25
    14 MMP_RS01175 triphosphoribosyl-dephospho-CoA synthase no 0.24
    15 MMP_RS04955 DNA topoisomerase I no 0.24
    16 MMP_RS04585 AIR synthase related protein no 0.24
    17 MMP_RS02195 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase no 0.24
    18 MMP_RS02010 PHP domain-containing protein no 0.24
    19 MMP_RS07605 diadenylate cyclase no 0.23
    20 MMP_RS06275 ATP-dependent DNA helicase no 0.23

    Or look for negative cofitness