Top cofit genes for MMP_RS03540 from Methanococcus maripaludis S2

DUF2178 domain-containing protein
SEED: conserved hypothetical archaeal protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	MMP_RS03535		helix-turn-helix transcriptional regulator	no	0.54
2	MMP_RS05145		hypothetical protein	no	0.48
3	MMP_RS07620		energy-coupling factor ABC transporter substrate-binding protein	no	0.47
4	MMP_RS07615		energy-coupling factor ABC transporter permease	no	0.41
5	MMP_RS05445		CoB--CoM heterodisulfide reductase subunit B	no	0.40
6	MMP_RS07555		monovalent cation/H+ antiporter subunit E	no	0.33
7	MMP_RS05450		CoB--CoM heterodisulfide reductase subunit C	no	0.33
8	MMP_RS02475		hypothetical protein	no	0.32
9	MMP_RS02800		nucleotidyltransferase domain-containing protein	no	0.31
10	MMP_RS02450		hypothetical protein	no	0.31
11	MMP_RS03700		sodium:proton antiporter	no	0.31
12	MMP_RS08675		class III signal peptide-containing protein	no	0.26
13	MMP_RS03460		U32 family peptidase	no	0.25
14	MMP_RS09035		hypothetical protein	no	0.24
15	MMP_RS05620		radical SAM protein	no	0.24
16	MMP_RS03080		universal stress protein	no	0.23
17	MMP_RS05925		small nuclear ribonucleoprotein	no	0.23
18	MMP_RS01665		DUF2111 domain-containing protein	no	0.23
19	MMP_RS04060		hypothetical protein	no	0.22
20	MMP_RS04665		SBBP repeat-containing protein	no	0.22

Or look for negative cofitness