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  • Top cofit genes for MMP_RS03490 from Methanococcus maripaludis S2

    DUF2115 domain-containing protein
    SEED: UPF0305 protein MJ0646

    Rank Hit Name Description Conserved? Cofitness  
    1 MMP_RS07880 AAA family ATPase no 0.34
    2 MMP_RS07650 TldD/PmbA family protein no 0.33
    3 MMP_RS08130 IGHMBP2 family helicase no 0.31
    4 MMP_RS06010 heavy metal translocating P-type ATPase no 0.28
    5 MMP_RS08700 hypothetical protein no 0.28
    6 MMP_RS01785 hypothetical protein no 0.28
    7 MMP_RS04060 hypothetical protein no 0.27
    8 MMP_RS03840 hypothetical protein no 0.26
    9 MMP_RS03065 AzlC family ABC transporter permease no 0.26
    10 MMP_RS09065 hypothetical protein no 0.26
    11 MMP_RS02025 DNA-directed DNA polymerase no 0.26
    12 MMP_RS04320 uroporphyrinogen decarboxylase family protein no 0.25
    13 MMP_RS04405 hypothetical protein no 0.25
    14 MMP_RS00155 heavy metal-binding domain-containing protein no 0.25
    15 MMP_RS07905 DUF3343 domain-containing protein no 0.24
    16 MMP_RS03000 cupin domain-containing protein no 0.24
    17 MMP_RS06710 selenium-binding protein no 0.24
    18 MMP_RS07850 prephenate dehydratase no 0.24
    19 MMP_RS06540 3-methyl-2-oxobutanoate dehydrogenase subunit VorB no 0.24
    20 MMP_RS00660 alkaline phosphatase family protein no 0.23

    Or look for negative cofitness