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  • Top cofit genes for MMP_RS03460 from Methanococcus maripaludis S2

    U32 family peptidase
    SEED: Collagenase
    KEGG: putative protease

    Rank Hit Name Description Conserved? Cofitness  
    1 MMP_RS01960 hypothetical protein no 0.31
    2 MMP_RS03115 hypothetical protein no 0.31
    3 MMP_RS05245 archaeosine biosynthesis radical SAM protein RaSEA no 0.29
    4 MMP_RS00880 ribosome assembly RNA-binding protein YhbY 0.51 0.28
    5 MMP_RS00325 RNA-binding protein no 0.28
    6 MMP_RS03125 cell division ATPase MinD no 0.28
    7 MMP_RS06900 coenzyme F420-reducing hydrogenase FrhD protein 0.56 0.28
    8 MMP_RS03250 MJ1244 family protein no 0.27
    9 MMP_RS07755 DUF555 domain-containing protein no 0.27
    10 MMP_RS03080 universal stress protein no 0.27
    11 MMP_RS07750 DUF357 domain-containing protein no 0.27
    12 MMP_RS03210 tRNA guanosine(15) transglycosylase TgtA no 0.26
    13 MMP_RS01890 nucleotide sugar dehydrogenase no 0.26
    14 MMP_RS03390 malate dehydrogenase 0.67 0.26
    15 MMP_RS04885 sulfite exporter TauE/SafE family protein no 0.26
    16 MMP_RS09045 class III signal peptide-containing protein no 0.25
    17 MMP_RS03540 DUF2178 domain-containing protein no 0.25
    18 MMP_RS06770 DHH family phosphoesterase no 0.25
    19 MMP_RS01665 DUF2111 domain-containing protein no 0.25
    20 MMP_RS01880 DegT/DnrJ/EryC1/StrS family aminotransferase 0.16 0.25

    Or look for negative cofitness