Top cofit genes for MMP_RS03235 from Methanococcus maripaludis S2

tRNA pseudouridine(13) synthase TruD
SEED: tRNA pseudouridine 13 synthase (EC 4.2.1.-)
KEGG: tRNA pseudouridine synthase D

Rank	Hit	Name	Description	Conserved?	Cofitness
1	MMP_RS06920		AAA family ATPase	no	0.29
2	MMP_RS04800		chemotaxis protein CheW	no	0.29
3	MMP_RS04430		DUF1847 domain-containing protein	no	0.27
4	MMP_RS04020		hypothetical protein	no	0.27
5	MMP_RS04580		hypothetical protein	no	0.27
6	MMP_RS03065		AzlC family ABC transporter permease	no	0.26
7	MMP_RS04805		chemotaxis response regulator protein-glutamate methylesterase	no	0.26
8	MMP_RS01965		DUF1616 domain-containing protein	no	0.25
9	MMP_RS00905		phenylacetate--CoA ligase	no	0.25
10	MMP_RS04095		serine protease	no	0.25
11	MMP_RS02370		NifB/NifX family molybdenum-iron cluster-binding protein	no	0.24
12	MMP_RS03655		DUF1894 domain-containing protein	no	0.24
13	MMP_RS00675		nitroreductase family protein	no	0.23
14	MMP_RS02165		tRNA-dihydrouridine synthase	no	0.23
15	MMP_RS04085		hypothetical protein	no	0.23
16	MMP_RS04675		selenouridine synthase SelU-like subunit	no	0.22
17	MMP_RS03220		RNA 2' 3'-cyclic phosphodiesterase	no	0.22
18	MMP_RS05275		AI-2E family transporter	no	0.22
19	MMP_RS03890		DUF2540 domain-containing protein	no	0.22
20	MMP_RS03820		EamA family transporter	no	0.22

Or look for negative cofitness