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  • Top cofit genes for MMP_RS03220 from Methanococcus maripaludis S2

    RNA 2' 3'-cyclic phosphodiesterase
    SEED: 2'-5' RNA ligase
    KEGG: 2'-5' RNA ligase

    Rank Hit Name Description Conserved? Cofitness  
    1 MMP_RS04190 hypothetical protein no 0.54
    2 MMP_RS06910 RlmF-related methyltransferase no 0.52
    3 MMP_RS02375 hypothetical protein no 0.49
    4 MMP_RS04800 chemotaxis protein CheW no 0.44
    5 MMP_RS06065 iron ABC transporter substrate-binding protein no 0.44
    6 MMP_RS00990 hypothetical protein no 0.43
    7 MMP_RS04145 hypothetical protein no 0.42
    8 MMP_RS01055 hypothetical protein no 0.42
    9 MMP_RS01570 hypothetical protein no 0.41
    10 MMP_RS02170 CBS domain-containing protein no 0.41
    11 MMP_RS03065 AzlC family ABC transporter permease no 0.41
    12 MMP_RS01855 2-hydroxyacyl-CoA dehydratase family protein no 0.41
    13 MMP_RS06305 transporter substrate-binding domain-containing protein no 0.41
    14 MMP_RS01320 hypothetical protein no 0.40
    15 MMP_RS00290 hypothetical protein no 0.40
    16 MMP_RS02300 NAD(P)H-dependent oxidoreductase no 0.38
    17 MMP_RS06345 formate dehydrogenase accessory sulfurtransferase FdhD no 0.38
    18 MMP_RS00855 DUF367 family protein no 0.38
    19 MMP_RS04205 carboxymuconolactone decarboxylase family protein no 0.38
    20 MMP_RS04115 cytosine permease no 0.38

    Or look for negative cofitness