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  • Top cofit genes for MMP_RS02895 from Methanococcus maripaludis S2

    DHH family phosphoesterase
    SEED: Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)
    KEGG: archaea-specific RecJ-like exonuclease

    Rank Hit Name Description Conserved? Cofitness  
    1 MMP_RS06335 HAD family hydrolase no 0.41
    2 MMP_RS05530 signal peptide peptidase SppA no 0.32
    3 MMP_RS02960 class I SAM-dependent methyltransferase family protein no 0.30
    4 MMP_RS05975 hypothetical protein no 0.30
    5 MMP_RS01775 TIGR00297 family protein no 0.30
    6 MMP_RS08345 4Fe-4S binding protein no 0.30
    7 MMP_RS00280 DUF2118 domain-containing protein no 0.29
    8 MMP_RS03450 glycine synthesis protein GlyXS (from data) no 0.29
    9 MMP_RS08340 4Fe-4S binding protein no 0.29
    10 MMP_RS00085 DNA cytosine methyltransferase no 0.29
    11 MMP_RS04370 hypothetical protein no 0.29
    12 MMP_RS00545 XRE family transcriptional regulator no 0.28
    13 MMP_RS06325 hypothetical protein no 0.28
    14 MMP_RS08335 NADH-quinone oxidoreductase subunit B family protein no 0.28
    15 MMP_RS06375 ATP-dependent sacrificial sulfur transferase LarE no 0.28
    16 MMP_RS00285 TIGR04013 family B12-binding domain/radical SAM domain-containing protein 0.35 0.27
    17 MMP_RS01455 nickel pincer cofactor biosynthesis protein LarC no 0.27
    18 MMP_RS04790 4-hydroxy-tetrahydrodipicolinate reductase no 0.27
    19 MMP_RS08100 8-amino-7-oxononanoate synthase no 0.27
    20 MMP_RS03345 hypothetical protein no 0.27

    Or look for negative cofitness