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Cofit
Protein
Homologs
Top cofit genes for MMP_RS02550 from
Methanococcus maripaludis S2
helix-turn-helix transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
MMP
_RS06485
zinc ribbon domain-containing protein
no
0.29
2
MMP
_RS05950
nickel-dependent hydrogenase large subunit
no
0.28
3
MMP
_RS04410
hypothetical protein
no
0.27
4
MMP
_RS08365
energy conserving hydrogenase EhbF
no
0.26
5
MMP
_RS08355
Na(+)/H(+) antiporter subunit B
no
0.25
6
MMP
_RS04390
hypothetical protein
no
0.25
7
MMP
_RS08345
4Fe-4S binding protein
no
0.24
8
MMP
_RS07815
DUF2120 domain-containing protein
no
0.23
9
MMP
_RS08335
NADH-quinone oxidoreductase subunit B family protein
no
0.23
10
MMP
_RS03150
phosphoglycerate mutase
no
0.22
11
MMP
_RS03545
ATP-binding protein
no
0.22
12
MMP
_RS07355
transcription factor S
no
0.22
13
MMP
_RS06840
DNA-directed RNA polymerase subunit N
no
0.22
14
MMP
_RS06870
DedA family protein
no
0.22
15
MMP
_RS01415
DUF2067 domain-containing protein
no
0.22
16
MMP
_RS08330
NADH-quinone oxidoreductase subunit H
no
0.21
17
MMP
_RS04165
TetR/AcrR family transcriptional regulator
no
0.20
18
MMP
_RS06530
bifunctional hexulose-6-phosphate synthase/ribonuclease regulator
no
0.20
19
MMP
_RS08845
archaellum operon transcriptional activator EarA family protein
no
0.20
20
MMP
_RS01660
hypothetical protein
no
0.20
Or look for
negative cofitness