Top cofit genes for MMP_RS02415 from Methanococcus maripaludis S2

site-specific integrase
SEED: Phage integrase

Rank	Hit	Name	Description	Conserved?	Cofitness
1	MMP_RS07790		segregation/condensation protein A	no	0.28
2	MMP_RS03615		4Fe-4S binding protein	no	0.25
3	MMP_RS04960		cytochrome c biogenesis CcdA family protein	0.41	0.25
4	MMP_RS07190		chromosome segregation protein SMC	no	0.24
5	MMP_RS04550		S-layer protein	no	0.24
6	MMP_RS03620		hypothetical protein	no	0.23
7	MMP_RS03100		hypothetical protein	no	0.21
8	MMP_RS04665		SBBP repeat-containing protein	no	0.21
9	MMP_RS04120		hypothetical protein	no	0.21
10	MMP_RS07885		tripartite tricarboxylate transporter permease	no	0.21
11	MMP_RS03010		cupin domain-containing protein	no	0.21
12	MMP_RS06500		ATP-binding protein	no	0.20
13	MMP_RS04580		hypothetical protein	no	0.20
14	MMP_RS00280		DUF2118 domain-containing protein	0.40	0.20
15	MMP_RS02340		DNA-directed RNA polymerase subunit E''	no	0.19
16	MMP_RS02795		sulfate permease	no	0.19
17	MMP_RS03675		RimK family alpha-L-glutamate ligase	no	0.19
18	MMP_RS05345		hypothetical protein	no	0.19
19	MMP_RS02190		sulfopyruvate decarboxylase subunit alpha	no	0.19
20	MMP_RS04350		2-hydroxyacyl-CoA dehydratase family protein	no	0.19

Or look for negative cofitness