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Cofit
Protein
Homologs
Top cofit genes for MMP_RS02265 from
Methanococcus maripaludis S2
nitroreductase family protein
SEED: Nitroreductase family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
MMP
_RS04475
nitrogen fixation
no
0.33
2
MMP
_RS07420
metalloregulator ArsR/SmtB family transcription factor
no
0.30
3
MMP
_RS04065
hypothetical protein
no
0.30
4
MMP
_RS05360
hypothetical protein
no
0.30
5
MMP
_RS00880
ribosome assembly RNA-binding protein YhbY
no
0.29
6
MMP
_RS08975
hypothetical protein
no
0.28
7
MMP
_RS01370
acetate--CoA ligase family protein
0.56
0.28
8
MMP
_RS06535
2-oxoacid:acceptor oxidoreductase family protein
no
0.27
9
MMP
_RS06555
cupin domain-containing protein
0.28
0.27
10
MMP
_RS03425
hypothetical protein
no
0.27
11
MMP
_RS06530
bifunctional hexulose-6-phosphate synthase/ribonuclease regulator
0.33
0.26
12
MMP
_RS04230
hypothetical protein
no
0.26
13
MMP
_RS06435
CBS domain-containing protein
0.27
0.26
14
MMP
_RS06980
tRNA 2-thiocytidine biosynthesis TtcA family protein
no
0.26
15
MMP
_RS04510
ABC transporter permease subunit
no
0.25
16
MMP
_RS04700
hypothetical protein
no
0.25
17
MMP
_RS09010
hypothetical protein
no
0.25
18
MMP
_RS00150
AAA family ATPase
no
0.25
19
MMP
_RS05640
UTP--glucose-1-phosphate uridylyltransferase GalU
no
0.25
20
MMP
_RS08880
hypothetical protein
no
0.25
Or look for
negative cofitness