Top cofit genes for MMP_RS02005 from Methanococcus maripaludis S2

RNA ligase
SEED: ATP-dependent DNA ligase, homolog of eukaryotic ligase III
KEGG: putative ATP-dependent DNA ligase

Rank	Hit	Name	Description	Conserved?	Cofitness
1	MMP_RS00100		tRNA pseudouridine(13) synthase TruD	no	0.20
2	MMP_RS02890		TIGR00296 family protein	no	0.18
3	MMP_RS06935		protease complex subunit PrcB family protein	no	0.17
4	MMP_RS06365		hypothetical protein	no	0.16
5	MMP_RS01100		ABC transporter ATP-binding protein	no	0.16
6	MMP_RS03940		McrC family protein	no	0.16
7	MMP_RS03010		cupin domain-containing protein	no	0.16
8	MMP_RS02305		DUF378 domain-containing protein	no	0.16
9	MMP_RS04350		2-hydroxyacyl-CoA dehydratase family protein	0.26	0.16
10	MMP_RS04845		CheF family chemotaxis protein	no	0.15
11	MMP_RS03880		Fic family protein	no	0.15
12	MMP_RS00935		MATE family efflux transporter	no	0.15
13	MMP_RS05820		RNA-binding transcriptional accessory protein	no	0.15
14	MMP_RS03385		cation diffusion facilitator family transporter	no	0.15
15	MMP_RS02415		site-specific integrase	no	0.14
16	MMP_RS05925		small nuclear ribonucleoprotein	no	0.14
17	MMP_RS06395		ThiF family adenylyltransferase	no	0.14
18	MMP_RS08175		7-cyano-7-deazaguanine synthase	no	0.14
19	MMP_RS03965		hypothetical protein	0.26	0.14
20	MMP_RS00150		AAA family ATPase	no	0.14

Or look for negative cofitness