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Cofit
Protein
Homologs
Top cofit genes for MMJJ_RS09200 from
Methanococcus maripaludis JJ
Nre family DNA repair protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
MMJJ
_RS08580
YkgJ family cysteine cluster protein
no
0.47
2
MMJJ
_RS04515
HD domain-containing protein
no
0.46
3
MMJJ
_RS07850
ATP-binding protein
no
0.46
4
MMJJ
_RS07435
SMC family ATPase
no
0.46
5
MMJJ
_RS07440
metallophosphoesterase
no
0.44
6
MMJJ
_RS07175
DEAD/DEAH box helicase
0.39
0.43
7
MMJJ
_RS08125
DNA double-strand break repair nuclease NurA
no
0.42
8
MMJJ
_RS01300
MarR family transcriptional regulator
no
0.40
9
MMJJ
_RS01915
precorrin-6A reductase
no
0.40
10
MMJJ
_RS03600
TrmJ/YjtD family RNA methyltransferase
no
0.40
11
MMJJ
_RS02325
hypothetical protein
no
0.39
12
MMJJ
_RS07775
fluoride efflux transporter CrcB
no
0.39
13
MMJJ
_RS06000
cation:proton antiporter subunit C
no
0.38
14
MMJJ
_RS00950
DUF111 family protein
no
0.38
15
MMJJ
_RS09220
cupredoxin family copper-binding protein
no
0.38
16
MMJJ
_RS00655
CBS domain-containing protein
no
0.37
17
MMJJ
_RS02380
hypothetical protein
no
0.37
18
MMJJ
_RS04070
DUF2341 domain-containing protein
no
0.37
19
MMJJ
_RS03725
sulfurtransferase TusA family protein
no
0.36
20
MMJJ
_RS05160
RNA-binding protein
no
0.36
Or look for
negative cofitness