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Cofit
Protein
Homologs
Top cofit genes for MMJJ_RS09090 from
Methanococcus maripaludis JJ
TetR/AcrR family transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
MMJJ
_RS09095
MMPL family transporter
0.88
0.65
2
MMJJ
_RS04515
HD domain-containing protein
no
0.61
3
MMJJ
_RS09100
COG1361 S-layer family protein
0.89
0.60
4
MMJJ
_RS07485
DedA family protein
no
0.52
5
MMJJ
_RS00390
proteasome assembly chaperone family protein
no
0.48
6
MMJJ
_RS08765
glycosyltransferase family 9 protein
no
0.47
7
MMJJ
_RS08770
HAD family hydrolase
no
0.47
8
MMJJ
_RS03485
radical SAM protein
no
0.45
9
MMJJ
_RS00670
nitrogen fixation
no
0.45
10
MMJJ
_RS03155
hypothetical protein
no
0.45
11
MMJJ
_RS08710
UTP--glucose-1-phosphate uridylyltransferase GalU
no
0.44
12
MMJJ
_RS08240
L-fuculose phosphate aldolase
no
0.43
13
MMJJ
_RS05800
coenzyme F420-0:L-glutamate ligase
no
0.43
14
MMJJ
_RS04000
NAD(P)H-hydrate dehydratase
0.49
0.43
15
MMJJ
_RS05110
ammonium transporter
no
0.43
16
MMJJ
_RS07280
phosphomannomutase/phosphoglucomutase
no
0.42
17
MMJJ
_RS03995
PHP domain-containing protein
0.56
0.42
18
MMJJ
_RS05745
type II/IV secretion system ATPase subunit
no
0.42
19
MMJJ
_RS05105
P-II family nitrogen regulator
no
0.41
20
MMJJ
_RS08775
PfkB family carbohydrate kinase
no
0.41
Or look for
negative cofitness