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Cofit
Protein
Homologs
Top cofit genes for MMJJ_RS08875 from
Methanococcus maripaludis JJ
hypothetical protein
SEED: putative ATP-dependent protease
Rank
Hit
Name
Description
Conserved?
Cofitness
1
MMJJ
_RS00900
PC4/YdbC family ssDNA-binding protein
no
0.50
2
MMJJ
_RS01300
MarR family transcriptional regulator
no
0.48
3
MMJJ
_RS04040
prefoldin subunit beta
no
0.46
4
MMJJ
_RS00350
phage infection protein
no
0.45
5
MMJJ
_RS04610
ribosome assembly RNA-binding protein YhbY
no
0.45
6
MMJJ
_RS04195
XTP/dITP diphosphatase
no
0.44
7
MMJJ
_RS03600
TrmJ/YjtD family RNA methyltransferase
no
0.42
8
MMJJ
_RS08770
HAD family hydrolase
no
0.42
9
MMJJ
_RS03290
amidohydrolase
no
0.42
10
MMJJ
_RS01855
MBL fold metallo-hydrolase
no
0.42
11
MMJJ
_RS02875
site-2 protease family protein
no
0.39
12
MMJJ
_RS07485
DedA family protein
no
0.38
13
MMJJ
_RS06790
nucleotidyltransferase family protein
no
0.38
14
MMJJ
_RS08180
ABC transporter ATP-binding protein
no
0.37
15
MMJJ
_RS06605
DUF357 domain-containing protein
no
0.36
16
MMJJ
_RS08825
hypothetical protein
no
0.36
17
MMJJ
_RS03630
AMP phosphorylase
no
0.36
18
MMJJ
_RS04070
DUF2341 domain-containing protein
no
0.36
19
MMJJ
_RS09125
CBS domain-containing protein
no
0.36
20
MMJJ
_RS05340
AAA family ATPase
no
0.35
Or look for
negative cofitness