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  • Top cofit genes for MMJJ_RS08135 from Methanococcus maripaludis JJ

    30S ribosomal protein S6e
    SEED: SSU ribosomal protein S6e
    KEGG: small subunit ribosomal protein S6e

    Rank Hit Name Description Conserved? Cofitness  
    1 MMJJ_RS04045 DHH family phosphoesterase no 0.53
    2 MMJJ_RS01500 transcriptional regulator no 0.53
    3 MMJJ_RS03960 DUF2067 domain-containing protein no 0.53
    4 MMJJ_RS08500 L-sulfolactate dehydrogenase no 0.47
    5 MMJJ_RS08945 DUF61 family protein no 0.46
    6 MMJJ_RS07975 ATP-dependent sacrificial sulfur transferase LarE no 0.46
    7 MMJJ_RS07005 transcription factor S no 0.46
    8 MMJJ_RS00935 nickel pincer cofactor biosynthesis protein LarB no 0.46
    9 MMJJ_RS08430 small nuclear ribonucleoprotein no 0.44
    10 MMJJ_RS01235 excinuclease ABC subunit UvrA no 0.44
    11 MMJJ_RS03920 nickel pincer cofactor biosynthesis protein LarC no 0.43
    12 MMJJ_RS00025 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA no 0.42
    13 MMJJ_RS01965 radical SAM protein no 0.42
    14 MMJJ_RS09085 minichromosome maintenance protein MCM no 0.41
    15 MMJJ_RS03765 hypothetical protein no 0.41
    16 MMJJ_RS00285 UPF0254 family protein no 0.41
    17 MMJJ_RS04640 TIGR01177 family methyltransferase no 0.41
    18 MMJJ_RS05165 class I SAM-dependent methyltransferase no 0.41
    19 MMJJ_RS08060 DNA repair and recombination protein RadA no 0.41
    20 MMJJ_RS04760 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC no 0.41

    Or look for negative cofitness