Top cofit genes for MMJJ_RS07635 from Methanococcus maripaludis JJ

response regulator transcription factor
SEED: DNA-binding response regulator

Rank	Hit	Name	Description	Conserved?	Cofitness
1	MMJJ_RS07640		cache domain-containing protein	0.99	0.99
2	MMJJ_RS07650		formate/nitrite transporter family protein	0.91	0.97
3	MMJJ_RS07660		carbonic anhydrase	no	0.94
4	MMJJ_RS08065		precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT	no	0.90
5	MMJJ_RS08005		formate dehydrogenase accessory sulfurtransferase FdhD	0.86	0.87
6	MMJJ_RS07665		formate dehydrogenase subunit alpha	0.85	0.86
7	MMJJ_RS07655		hypothetical protein	0.84	0.86
8	MMJJ_RS07670		Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain	0.83	0.85
9	MMJJ_RS06050		molybdopterin molybdotransferase MoeA	0.64	0.83
10	MMJJ_RS02190		molybdopterin biosynthesis protein	0.58	0.80
11	MMJJ_RS06945		molybdopterin-guanine dinucleotide biosynthesis protein MobB	no	0.78
12	MMJJ_RS05540		LysR family transcriptional regulator	no	0.76
13	MMJJ_RS02055		GTP 3',8-cyclase MoaA	0.68	0.70
14	MMJJ_RS03500		F420-dependent methylenetetrahydromethanopterin dehydrogenase	0.59	0.70
15	MMJJ_RS07995		molybdenum cofactor biosynthesis protein MoaE	0.62	0.67
16	MMJJ_RS01375		tetrahydromethanopterin:alpha-L-glutamate ligase	no	0.65
17	MMJJ_RS08855		cyclic pyranopterin monophosphate synthase MoaC	0.64	0.65
18	MMJJ_RS00440		selenide, water dikinase SelD	no	0.64
19	MMJJ_RS02195		AmmeMemoRadiSam system radical SAM enzyme	no	0.63
20	MMJJ_RS08000		HesA/MoeB/ThiF family protein	0.65	0.61

Or look for negative cofitness