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  • Top cofit genes for MMJJ_RS04855 from Methanococcus maripaludis JJ

    ECF transporter S component
    SEED: Substrate-specific component STY3230 of queuosine-regulated ECF transporter

    Rank Hit Name Description Conserved? Cofitness  
    1 MMJJ_RS00885 coenzyme F420-reducing hydrogenase, FrhD protein no 0.35
    2 MMJJ_RS00920 hypothetical protein no 0.35
    3 MMJJ_RS08455 tetratricopeptide repeat protein no 0.34
    4 MMJJ_RS00880 coenzyme F420 hydrogenase subunit alpha no 0.34
    5 MMJJ_RS04105 prepilin peptidase no 0.33
    6 MMJJ_RS04350 hypothetical protein no 0.31
    7 MMJJ_RS05580 methanogenesis marker 9 domain-containing protein no 0.31
    8 MMJJ_RS02195 AmmeMemoRadiSam system radical SAM enzyme no 0.30
    9 MMJJ_RS07205 MTH895/ArsE family thioredoxin-like protein no 0.30
    10 MMJJ_RS09225 hypothetical protein no 0.30
    11 MMJJ_RS02875 site-2 protease family protein no 0.29
    12 MMJJ_RS09220 cupredoxin family copper-binding protein no 0.28
    13 MMJJ_RS05685 class III signal peptide-containing protein no 0.28
    14 MMJJ_RS01375 tetrahydromethanopterin:alpha-L-glutamate ligase no 0.28
    15 MMJJ_RS08165 thermonuclease family protein no 0.28
    16 MMJJ_RS05350 DUF192 domain-containing protein no 0.28
    17 MMJJ_RS08410 CBS domain-containing protein no 0.27
    18 MMJJ_RS06945 molybdopterin-guanine dinucleotide biosynthesis protein MobB no 0.27
    19 MMJJ_RS08210 hypothetical protein no 0.27
    20 MMJJ_RS06395 sugar phosphate isomerase/epimerase no 0.27

    Or look for negative cofitness