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Cofit
Protein
Homologs
Top cofit genes for MMJJ_RS04815 from
Methanococcus maripaludis JJ
TIM barrel protein
SEED: Uncharacterized protein MJ0008
Rank
Hit
Name
Description
Conserved?
Cofitness
1
MMJJ
_RS04390
rhomboid family intramembrane serine protease
no
0.62
2
MMJJ
_RS07260
PspC domain-containing protein
no
0.58
3
MMJJ
_RS00405
flavodoxin family protein
no
0.55
4
MMJJ
_RS04725
branched-chain-amino-acid transaminase
no
0.54
5
MMJJ
_RS08285
class I SAM-dependent methyltransferase
no
0.54
6
MMJJ
_RS02330
ABC transporter ATP-binding protein
no
0.53
7
MMJJ
_RS02230
hypothetical protein
no
0.52
8
MMJJ
_RS03575
NUDIX hydrolase
no
0.51
9
MMJJ
_RS04225
aldo/keto reductase
no
0.50
10
MMJJ
_RS05530
roadblock/LC7 domain-containing protein
no
0.50
11
MMJJ
_RS07750
class III signal peptide-containing protein
no
0.50
12
MMJJ
_RS05385
hypothetical protein
no
0.50
13
MMJJ
_RS07775
fluoride efflux transporter CrcB
no
0.48
14
MMJJ
_RS04500
hypothetical protein
no
0.47
15
MMJJ
_RS07455
coenzyme F420-reducing hydrogenase, FrhD protein
no
0.47
16
MMJJ
_RS08870
2-isopropylmalate synthase
no
0.47
17
MMJJ
_RS08905
YcaO-related McrA-glycine thioamidation protein
no
0.46
18
MMJJ
_RS00890
coenzyme F420 hydrogenase subunit gamma
no
0.46
19
MMJJ
_RS08270
iron ABC transporter substrate-binding protein
no
0.46
20
MMJJ
_RS04530
iron export ABC transporter permease subunit FetB
0.43
0.46
Or look for
negative cofitness