Top cofit genes for MMJJ_RS04390 from Methanococcus maripaludis JJ

rhomboid family intramembrane serine protease

Rank	Hit	Name	Description	Conserved?	Cofitness
1	MMJJ_RS04400		AAA family ATPase	no	0.70
2	MMJJ_RS07750		class III signal peptide-containing protein	no	0.65
3	MMJJ_RS02230		hypothetical protein	no	0.64
4	MMJJ_RS04500		hypothetical protein	no	0.63
5	MMJJ_RS08285		class I SAM-dependent methyltransferase	no	0.63
6	MMJJ_RS04815		TIM barrel protein	no	0.62
7	MMJJ_RS07260		PspC domain-containing protein	no	0.60
8	MMJJ_RS02330		ABC transporter ATP-binding protein	no	0.60
9	MMJJ_RS04775		DNA-binding protein	no	0.58
10	MMJJ_RS03730		SWIM zinc finger family protein	no	0.57
11	MMJJ_RS00780		M48 family metallopeptidase	no	0.56
12	MMJJ_RS08235		UPF0147 family protein	no	0.56
13	MMJJ_RS03575		NUDIX hydrolase	no	0.56
14	MMJJ_RS02165		ABC transporter substrate-binding protein	no	0.56
15	MMJJ_RS00405		flavodoxin family protein	no	0.55
16	MMJJ_RS03015		Ig-like domain-containing protein	no	0.55
17	MMJJ_RS02160		amino acid ABC transporter permease	no	0.55
18	MMJJ_RS01395		DUF1894 domain-containing protein	no	0.55
19	MMJJ_RS04070		DUF2341 domain-containing protein	no	0.53
20	MMJJ_RS01055		hypothetical protein	no	0.53

Or look for negative cofitness