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  • Top cofit genes for MMJJ_RS02235 from Methanococcus maripaludis JJ

    DUF123 domain-containing protein
    SEED: Endonuclease III (EC 4.2.99.18)
    KEGG: endonuclease III

    Rank Hit Name Description Conserved? Cofitness  
    1 MMJJ_RS07590 flap endonuclease-1 no 0.83
    2 MMJJ_RS03280 DNA-directed DNA polymerase 0.29 0.77
    3 MMJJ_RS08495 FprA family A-type flavoprotein no 0.74
    4 MMJJ_RS08060 DNA repair and recombination protein RadA 0.36 0.72
    5 MMJJ_RS08490 rubrerythrin family protein no 0.72
    6 MMJJ_RS09085 minichromosome maintenance protein MCM no 0.71
    7 MMJJ_RS09030 hypothetical protein no 0.68
    8 MMJJ_RS01235 excinuclease ABC subunit UvrA no 0.67
    9 MMJJ_RS01735 rubrerythrin family protein no 0.64
    10 MMJJ_RS01245 excinuclease ABC subunit UvrB no 0.62
    11 MMJJ_RS05730 TIM barrel protein no 0.61
    12 MMJJ_RS08345 flavodoxin family protein 0.37 0.60
    13 MMJJ_RS01370 MnmC family methyltransferase no 0.60
    14 MMJJ_RS04285 ABC transporter substrate-binding protein no 0.60
    15 MMJJ_RS06555 ATP-binding cassette domain-containing protein no 0.60
    16 MMJJ_RS06550 ABC transporter permease no 0.59
    17 MMJJ_RS00145 aquaporin family protein no 0.58
    18 MMJJ_RS00150 DUF2180 family protein no 0.58
    19 MMJJ_RS06660 DUF1188 domain-containing protein no 0.57
    20 MMJJ_RS00155 DUF2193 domain-containing protein 0.35 0.57

    Or look for negative cofitness