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  • Top cofit genes for MMJJ_RS01415 from Methanococcus maripaludis JJ

    beta-CASP ribonuclease aCPSF1
    SEED: Protein similar to polyadenylation specificity factor, MJ1236 type

    Rank Hit Name Description Conserved? Cofitness  
    1 MMJJ_RS04200 triphosphoribosyl-dephospho-CoA synthase no 0.71
    2 MMJJ_RS03580 TIGR00303 family protein no 0.69
    3 MMJJ_RS07155 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase no 0.69
    4 MMJJ_RS08055 methanogenesis marker 14 protein no 0.68
    5 MMJJ_RS03820 hydrogenase formation protein HypD no 0.67
    6 MMJJ_RS08340 archaeoflavoprotein AfpA no 0.67
    7 MMJJ_RS04685 carbamoyltransferase HypF no 0.67
    8 MMJJ_RS02090 tyramine--L-glutamate ligase no 0.66
    9 MMJJ_RS08020 nucleotidyltransferase domain-containing protein no 0.66
    10 MMJJ_RS05260 ATP-grasp domain-containing protein no 0.65
    11 MMJJ_RS01935 O-phosphoseryl-tRNA(Sec) selenium transferase no 0.65
    12 MMJJ_RS06840 nickel-dependent hydrogenase large subunit no 0.65
    13 MMJJ_RS04995 Tfx family DNA-binding protein no 0.64
    14 MMJJ_RS04800 2-phospho-L-lactate guanylyltransferase no 0.64
    15 MMJJ_RS08250 hydrogenase maturation peptidase HycI no 0.64
    16 MMJJ_RS04790 biotin--[acetyl-CoA-carboxylase] ligase no 0.64
    17 MMJJ_RS05490 imidazole glycerol phosphate synthase subunit HisF no 0.64
    18 MMJJ_RS02045 molybdenum cofactor guanylyltransferase no 0.63
    19 MMJJ_RS04520 coenzyme F430 synthase no 0.63
    20 MMJJ_RS03110 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase no 0.63

    Or look for negative cofitness