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  • Top cofit genes for MMJJ_RS00505 from Methanococcus maripaludis JJ

    3'-5' exonuclease
    SEED: DNA polymerase III epsilon subunit (EC 2.7.7.7)

    Rank Hit Name Description Conserved? Cofitness  
    1 MMJJ_RS07840 Glu-tRNA(Gln) amidotransferase subunit GatD no 0.47
    2 MMJJ_RS00445 class III signal peptide-containing protein no 0.46
    3 MMJJ_RS00950 DUF111 family protein no 0.43
    4 MMJJ_RS01615 MoaD/ThiS family protein no 0.43
    5 MMJJ_RS00540 hypothetical protein no 0.43
    6 MMJJ_RS02860 site-specific integrase no 0.42
    7 MMJJ_RS03485 radical SAM protein no 0.42
    8 MMJJ_RS00290 CheF family chemotaxis protein no 0.40
    9 MMJJ_RS08040 NAD(P)/FAD-dependent oxidoreductase no 0.39
    10 MMJJ_RS01215 MATE family efflux transporter no 0.39
    11 MMJJ_RS04785 OB-fold nucleic acid binding domain-containing protein no 0.39
    12 MMJJ_RS01315 indolepyruvate oxidoreductase subunit beta no 0.39
    13 MMJJ_RS00175 cytochrome c biogenesis CcdA family protein no 0.39
    14 MMJJ_RS08770 HAD family hydrolase no 0.39
    15 MMJJ_RS08760 glycosyltransferase family 9 protein no 0.38
    16 MMJJ_RS00295 response regulator no 0.38
    17 MMJJ_RS03295 PHP domain-containing protein no 0.38
    18 MMJJ_RS09225 hypothetical protein no 0.37
    19 MMJJ_RS03530 phosphate ABC transporter substrate-binding protein no 0.37
    20 MMJJ_RS09070 hypothetical protein no 0.37

    Or look for negative cofitness