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  • Top cofit genes for MMJJ_RS00335 from Methanococcus maripaludis JJ

    chemotaxis protein CheW
    SEED: Positive regulator of CheA protein activity (CheW)
    KEGG: purine-binding chemotaxis protein CheW

    Rank Hit Name Description Conserved? Cofitness  
    1 MMJJ_RS01860 tRNA guanosine(15) transglycosylase TgtA no 0.47
    2 MMJJ_RS02355 DUF2798 domain-containing protein no 0.46
    3 MMJJ_RS01350 sodium:proton antiporter no 0.45
    4 MMJJ_RS08905 YcaO-related McrA-glycine thioamidation protein no 0.44
    5 MMJJ_RS07245 amidohydrolase family protein no 0.44
    6 MMJJ_RS00645 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.34 0.44
    7 MMJJ_RS03310 hypothetical protein no 0.44
    8 MMJJ_RS03170 DUF5612 domain-containing protein no 0.42
    9 MMJJ_RS04650 nitrogenase iron protein no 0.42
    10 MMJJ_RS01875 global nitrogen regulator NrpR no 0.42
    11 MMJJ_RS06260 6-carboxyhexanoate--CoA ligase no 0.42
    12 MMJJ_RS08925 winged helix-turn-helix transcriptional regulator no 0.42
    13 MMJJ_RS06165 archaeosine synthase subunit alpha no 0.42
    14 MMJJ_RS06215 agmatinase no 0.42
    15 MMJJ_RS06375 UbiX family flavin prenyltransferase no 0.41
    16 MMJJ_RS01960 glycosyltransferase family 2 protein no 0.41
    17 MMJJ_RS06600 DUF555 domain-containing protein no 0.41
    18 MMJJ_RS03005 Ni-sirohydrochlorin a,c-diamide reductive cyclase catalytic subunit no 0.41
    19 MMJJ_RS00320 chemotaxis protein CheD no 0.41
    20 MMJJ_RS07980 biotin synthase BioB no 0.41

    Or look for negative cofitness