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Cofit
Protein
Homologs
Top cofit genes for LRK55_RS18055 from
Rhodanobacter denitrificans MT42
TetR/AcrR family transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
LRK55
_RS16485
transglycosylase SLT domain-containing protein
no
0.92
2
LRK55
_RS05750
tRNA dihydrouridine(20/20a) synthase DusA
0.53
0.92
3
LRK55
_RS12360
fumarate hydratase
no
0.89
4
LRK55
_RS17925
FAD-binding oxidoreductase
0.54
0.88
5
LRK55
_RS08195
PAS domain-containing hybrid sensor histidine kinase/response regulator
0.45
0.88
6
LRK55
_RS04820
response regulator
no
0.85
7
LRK55
_RS03585
RNA polymerase sigma factor
no
0.84
8
LRK55
_RS00400
RNA chaperone Hfq
no
0.84
9
LRK55
_RS02640
amino acid permease
no
0.84
10
LRK55
_RS11715
FecR family protein
0.79
0.84
11
LRK55
_RS06875
bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA
0.52
0.83
12
LRK55
_RS05065
APC family permease
no
0.83
13
LRK55
_RS08125
DJ-1/PfpI family protein
no
0.82
14
LRK55
_RS02075
RcnB family protein
0.80
0.82
15
LRK55
_RS08190
response regulator transcription factor
0.51
0.82
16
LRK55
_RS15685
class I SAM-dependent methyltransferase
0.40
0.81
17
LRK55
_RS08075
phenylalanine 4-monooxygenase
0.34
0.81
18
LRK55
_RS06280
glycerol kinase GlpK
0.29
0.81
19
LRK55
_RS08070
Lrp/AsnC family transcriptional regulator
0.44
0.81
20
LRK55
_RS14420
hypothetical protein
0.79
0.81
Or look for
negative cofitness