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Cofit
Protein
Homologs
Top cofit genes for LRK55_RS08405 from
Rhodanobacter denitrificans MT42
pirin family protein
SEED: Pirin
Rank
Hit
Name
Description
Conserved?
Cofitness
1
LRK55
_RS15510
ABC transporter ATP-binding protein
no
0.79
2
LRK55
_RS15995
ABC transporter ATP-binding protein
no
0.76
3
LRK55
_RS13635
hemolysin III family protein
no
0.75
4
LRK55
_RS09610
type II secretion system major pseudopilin GspG
0.50
0.73
5
LRK55
_RS13865
response regulator transcription factor
no
0.72
6
LRK55
_RS16635
DUF2058 family protein
no
0.72
7
LRK55
_RS05190
TetR/AcrR family transcriptional regulator
no
0.71
8
LRK55
_RS14930
DUF2059 domain-containing protein
0.40
0.70
9
LRK55
_RS04590
VTT domain-containing protein
no
0.69
10
LRK55
_RS17055
MFS transporter
no
0.68
11
LRK55
_RS11395
5-formyltetrahydrofolate cyclo-ligase
0.39
0.68
12
LRK55
_RS04330
NAD(P)-dependent alcohol dehydrogenase
no
0.68
13
LRK55
_RS17530
hydrogenase 4 subunit B
no
0.67
14
LRK55
_RS02495
3'-5' exonuclease
no
0.67
15
LRK55
_RS08295
glycosyltransferase family 9 protein
no
0.66
16
LRK55
_RS06445
polysaccharide deacetylase family protein
no
0.66
17
LRK55
_RS19370
hypothetical protein
no
0.66
18
LRK55
_RS08330
hydroxymethylglutaryl-CoA reductase, degradative
no
0.66
19
LRK55
_RS10690
DUF938 domain-containing protein
no
0.65
20
LRK55
_RS17480
peptidogalycan biosysnthesis protein
0.50
0.65
Or look for
negative cofitness