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Cofit
Protein
Homologs
Top cofit genes for LRK55_RS07030 from
Rhodanobacter denitrificans MT42
TonB-dependent receptor
SEED: Colicin I receptor
Rank
Hit
Name
Description
Conserved?
Cofitness
1
LRK55
_RS17380
glycosyltransferase
no
0.97
2
LRK55
_RS06180
substrate-binding domain-containing protein
no
0.97
3
LRK55
_RS12575
RNA polymerase factor sigma-54
no
0.94
4
LRK55
_RS07715
decarboxylating 6-phosphogluconate dehydrogenase
no
0.92
5
LRK55
_RS06580
DUF2782 domain-containing protein
no
0.91
6
LRK55
_RS05505
transketolase
no
0.91
7
LRK55
_RS05475
hypothetical protein
0.48
0.91
8
LRK55
_RS12530
putative sulfate exporter family transporter
no
0.91
9
LRK55
_RS05535
S1/P1 nuclease
0.75
0.90
10
LRK55
_RS16590
pyruvate, water dikinase regulatory protein
0.81
0.90
11
LRK55
_RS02090
FUSC family protein
0.51
0.90
12
LRK55
_RS02315
MalM family protein
no
0.90
13
LRK55
_RS18605
phospholipase D family protein
no
0.90
14
LRK55
_RS14320
hypothetical protein
0.78
0.89
15
LRK55
_RS05395
hypothetical protein
no
0.89
16
LRK55
_RS06355
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
0.70
0.89
17
LRK55
_RS07730
nitrogen regulation protein NR(I)
no
0.89
18
LRK55
_RS09440
beta-ketoacyl-[acyl-carrier-protein] synthase family protein
0.57
0.89
19
LRK55
_RS12200
hypothetical protein
no
0.88
20
LRK55
_RS00485
alkyl hydroperoxide reductase subunit F
no
0.88
Or look for
negative cofitness