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Cofit
Protein
Homologs
Top cofit genes for LRK55_RS06480 from
Rhodanobacter denitrificans MT42
YceI family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
LRK55
_RS11625
efflux RND transporter periplasmic adaptor subunit
no
0.77
2
LRK55
_RS07950
nucleotidyltransferase domain-containing protein
no
0.73
3
LRK55
_RS13070
membrane assembly protein AsmA
no
0.71
4
LRK55
_RS10795
signal peptide peptidase SppA
0.60
0.70
5
LRK55
_RS10725
NAD(P)/FAD-dependent oxidoreductase
no
0.69
6
LRK55
_RS03520
hypothetical protein
no
0.69
7
LRK55
_RS08745
peptidoglycan DD-metalloendopeptidase family protein
no
0.68
8
LRK55
_RS11630
efflux RND transporter permease subunit
no
0.67
9
LRK55
_RS08810
TonB-dependent receptor
no
0.67
10
LRK55
_RS15225
peptidase M61
no
0.67
11
LRK55
_RS12535
LysR family transcriptional regulator
0.48
0.66
12
LRK55
_RS05260
serine hydrolase domain-containing protein
no
0.66
13
LRK55
_RS01815
transcription-repair coupling factor
0.81
0.65
14
LRK55
_RS07495
helix-turn-helix transcriptional regulator
no
0.65
15
LRK55
_RS05465
pyridoxal-phosphate dependent enzyme
no
0.65
16
LRK55
_RS00165
ATP-dependent Clp protease adapter ClpS
no
0.64
17
LRK55
_RS10185
TonB-dependent receptor
no
0.64
18
LRK55
_RS05245
choline dehydrogenase
0.35
0.63
19
LRK55
_RS09465
2,3-diphosphoglycerate-dependent phosphoglycerate mutase
no
0.63
20
LRK55
_RS16340
phosphopyruvate hydratase
no
0.63
Or look for
negative cofitness