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Cofit
Protein
Homologs
Top cofit genes for LRK55_RS04215 from
Rhodanobacter denitrificans MT42
ABC transporter permease
Rank
Hit
Name
Description
Conserved?
Cofitness
1
LRK55
_RS02045
amidohydrolase family protein
no
0.82
2
LRK55
_RS07800
YncE family protein
no
0.68
3
LRK55
_RS10235
LysR family transcriptional regulator
no
0.67
4
LRK55
_RS14375
cytochrome c biogenesis protein DipZ
no
0.66
5
LRK55
_RS15465
glycine betaine ABC transporter substrate-binding protein
no
0.66
6
LRK55
_RS10345
alpha/beta hydrolase
no
0.63
7
LRK55
_RS02140
N-acetyl-gamma-glutamyl-phosphate reductase
no
0.63
8
LRK55
_RS03160
ATP-binding protein
no
0.62
9
LRK55
_RS16545
hypothetical protein
no
0.60
10
LRK55
_RS14480
hypothetical protein
no
0.59
11
LRK55
_RS14210
ABC transporter permease subunit
0.35
0.58
12
LRK55
_RS05670
hypothetical protein
no
0.58
13
LRK55
_RS06540
type II 3-dehydroquinate dehydratase
no
0.58
14
LRK55
_RS05515
porin family protein
no
0.57
15
LRK55
_RS14025
NosR/NirI family protein
no
0.57
16
LRK55
_RS01615
HAD family phosphatase
0.50
0.57
17
LRK55
_RS09150
methyltransferase domain-containing protein
no
0.57
18
LRK55
_RS15085
TonB-dependent receptor
no
0.56
19
LRK55
_RS13025
hypothetical protein
no
0.56
20
LRK55
_RS05490
maleylacetoacetate isomerase
no
0.56
Or look for
negative cofitness