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Cofit
Protein
Homologs
Top cofit genes for LRK55_RS04010 from
Rhodanobacter denitrificans MT42
TonB-dependent siderophore receptor
Rank
Hit
Name
Description
Conserved?
Cofitness
1
LRK55
_RS04005
response regulator transcription factor
0.96
0.99
2
LRK55
_RS04000
HAMP domain-containing sensor histidine kinase
0.98
0.99
3
LRK55
_RS18310
DHHA1 domain-containing protein
no
0.89
4
LRK55
_RS16460
endopeptidase La
no
0.86
5
LRK55
_RS05525
energy transducer TonB
0.53
0.83
6
LRK55
_RS10215
YifB family Mg chelatase-like AAA ATPase
0.38
0.83
7
LRK55
_RS18260
translesion error-prone DNA polymerase V autoproteolytic subunit
no
0.82
8
LRK55
_RS18295
hypothetical protein
no
0.80
9
LRK55
_RS18320
hypothetical protein
no
0.79
10
LRK55
_RS13090
hypothetical protein
no
0.79
11
LRK55
_RS18230
hypothetical protein
no
0.76
12
LRK55
_RS14955
FTR1 family protein
0.68
0.76
13
LRK55
_RS00445
OmpA family protein
0.72
0.76
14
LRK55
_RS00340
class I SAM-dependent DNA methyltransferase
no
0.76
15
LRK55
_RS18315
hypothetical protein
no
0.76
16
LRK55
_RS18290
enhanced serine sensitivity protein SseB C-terminal domain-containing protein
no
0.75
17
LRK55
_RS18250
hypothetical protein
no
0.74
18
LRK55
_RS18235
hypothetical protein
no
0.74
19
LRK55
_RS18240
hypothetical protein
no
0.73
20
LRK55
_RS00465
2-methylcitrate synthase
no
0.72
Or look for
negative cofitness