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Cofit
Protein
Homologs
Top cofit genes for LRK55_RS01310 from
Rhodanobacter denitrificans MT42
amino acid permease
Rank
Hit
Name
Description
Conserved?
Cofitness
1
LRK55
_RS07760
amidohydrolase family protein
no
0.76
2
LRK55
_RS12710
LacI family DNA-binding transcriptional regulator
no
0.73
3
LRK55
_RS04400
serine hydroxymethyltransferase
0.61
0.73
4
LRK55
_RS00715
cupin domain-containing protein
no
0.72
5
LRK55
_RS05280
glycine cleavage system aminomethyltransferase GcvT
no
0.71
6
LRK55
_RS13775
prephenate dehydrogenase/arogenate dehydrogenase family protein
0.51
0.68
7
LRK55
_RS11475
YicC family protein
no
0.67
8
LRK55
_RS14280
acyl-CoA thioesterase II
no
0.67
9
LRK55
_RS11780
DUF1611 domain-containing protein
no
0.66
10
LRK55
_RS12750
Six-hairpin glycosidase-like protein
no
0.66
11
LRK55
_RS12780
TonB-dependent receptor
no
0.64
12
LRK55
_RS11710
tRNA (guanosine(46)-N7)-methyltransferase TrmB
no
0.64
13
LRK55
_RS10625
DEAD/DEAH box helicase
0.68
0.64
14
LRK55
_RS12810
protein kinase
no
0.63
15
LRK55
_RS01315
amino acid permease
0.73
0.63
16
LRK55
_RS04790
MFS transporter
no
0.62
17
LRK55
_RS07895
TolC family protein
no
0.62
18
LRK55
_RS05605
4-hydroxyphenylpyruvate dioxygenase
0.96
0.62
19
LRK55
_RS02040
hydroxymethylglutaryl-CoA lyase
no
0.61
20
LRK55
_RS05485
PilT/PilU family type 4a pilus ATPase
0.25
0.61
Or look for
negative cofitness