Top cofit genes for LRK54_RS16575 from Rhodanobacter denitrificans FW104-10B01

GGDEF domain-containing phosphodiesterase
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Rank Hit Name Description Conserved? Cofitness  
1 LRK54_RS16565 cbb3-type cytochrome c oxidase subunit I 0.92 0.89
2 LRK54_RS11585 cAMP-activated global transcriptional regulator CRP 0.54 0.79
3 LRK54_RS07145 OmpP1/FadL family transporter 0.49 0.71
4 LRK54_RS13485 sigma-54-dependent Fis family transcriptional regulator 0.69 0.65
5 LRK54_RS13580 RNA polymerase sigma factor FliA 0.66 0.64
6 LRK54_RS13565 flagellar biosynthesis protein FlhA 0.72 0.64
7 LRK54_RS13430 flagellar basal-body rod protein FlgG no 0.52
8 LRK54_RS13545 flagellar type III secretion system pore protein FliP no 0.52
9 LRK54_RS13525 flagellar basal body-associated FliL family protein no 0.51
10 LRK54_RS13570 flagellar biosynthesis protein FlhF no 0.50
11 LRK54_RS13410 flagellar basal body rod protein FlgC no 0.50
12 LRK54_RS13510 flagellar protein export ATPase FliI 0.79 0.49
13 LRK54_RS13550 flagellar biosynthesis protein FliQ no 0.47
14 LRK54_RS07005 spore coat protein U domain-containing protein no 0.47
15 LRK54_RS13420 flagellar hook protein FlgE 0.80 0.47
16 LRK54_RS13800 DUF1631 domain-containing protein no 0.47
17 LRK54_RS13560 flagellar biosynthesis protein FlhB no 0.46
18 LRK54_RS03860 nitroreductase no 0.46
19 LRK54_RS11875 VWA domain-containing protein no 0.45
20 LRK54_RS11885 BatD family protein no 0.45

Or look for negative cofitness