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Cofit
Protein
Homologs
Top cofit genes for LRK54_RS14230 from
Rhodanobacter denitrificans FW104-10B01
GspH/FimT family pseudopilin
Rank
Hit
Name
Description
Conserved?
Cofitness
1
LRK54
_RS16385
hypothetical protein
no
0.29
2
LRK54
_RS05160
DegT/DnrJ/EryC1/StrS family aminotransferase
no
0.29
3
LRK54
_RS03740
YihY family inner membrane protein
no
0.27
4
LRK54
_RS14225
glucose 1-dehydrogenase
no
0.24
5
LRK54
_RS02215
GspH/FimT family pseudopilin
no
0.23
6
LRK54
_RS05355
M20/M25/M40 family metallo-hydrolase
no
0.23
7
LRK54
_RS04150
adenosylmethionine--8-amino-7-oxononanoate transaminase
no
0.23
8
LRK54
_RS10215
sterol desaturase family protein
no
0.22
9
LRK54
_RS04115
DUF4097 family beta strand repeat-containing protein
no
0.22
10
LRK54
_RS07945
LytTR family DNA-binding domain-containing protein
no
0.22
11
LRK54
_RS04195
twitching motility response regulator PilG
no
0.22
12
LRK54
_RS03950
type II secretion system F family protein
0.44
0.22
13
LRK54
_RS01920
efflux RND transporter periplasmic adaptor subunit
no
0.21
14
LRK54
_RS16640
tRNA pseudouridine(13) synthase TruD
no
0.21
15
LRK54
_RS09425
TonB-dependent receptor
no
0.21
16
LRK54
_RS02190
type IV pilin protein
0.49
0.21
17
LRK54
_RS14235
excinuclease ABC subunit UvrB
no
0.20
18
LRK54
_RS03960
A24 family peptidase
no
0.20
19
LRK54
_RS03945
type IV-A pilus assembly ATPase PilB
0.49
0.20
20
LRK54
_RS01640
transcriptional repressor
no
0.20
Or look for
negative cofitness