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Cofit
Protein
Homologs
Top cofit genes for LRK54_RS09900 from
Rhodanobacter denitrificans FW104-10B01
type I-U CRISPR-associated RAMP protein Csb1/Cas7u
Rank
Hit
Name
Description
Conserved?
Cofitness
1
LRK54
_RS09890
type I-U CRISPR-associated helicase/endonuclease Cas3
no
0.46
2
LRK54
_RS12625
bifunctional aspartate kinase/diaminopimelate decarboxylase
no
0.41
3
LRK54
_RS12710
DNA starvation/stationary phase protection protein
no
0.40
4
LRK54
_RS02395
acetylornithine deacetylase
no
0.39
5
LRK54
_RS13225
aminoglycoside phosphotransferase family protein
no
0.39
6
LRK54
_RS04625
serine hydroxymethyltransferase
no
0.38
7
LRK54
_RS02415
N-acetylornithine carbamoyltransferase
no
0.38
8
LRK54
_RS02390
acetylglutamate kinase
no
0.38
9
LRK54
_RS02380
argininosuccinate lyase
no
0.37
10
LRK54
_RS10320
dihydroxy-acid dehydratase
no
0.36
11
LRK54
_RS10350
hypothetical protein
no
0.36
12
LRK54
_RS03185
phosphoglycerate dehydrogenase
no
0.36
13
LRK54
_RS10315
ketol-acid reductoisomerase
no
0.36
14
LRK54
_RS03180
FAD-binding oxidoreductase
no
0.36
15
LRK54
_RS02120
methionine synthase
no
0.36
16
LRK54
_RS03105
phosphotransferase
no
0.36
17
LRK54
_RS07930
transposase
no
0.36
18
LRK54
_RS12945
phosphoribosylformylglycinamidine cyclo-ligase
no
0.36
19
LRK54
_RS10345
2-isopropylmalate synthase
no
0.35
20
LRK54
_RS00305
asparagine synthase B
no
0.35
Or look for
negative cofitness