Top cofit genes for LRK54_RS09890 from Rhodanobacter denitrificans FW104-10B01

type I-U CRISPR-associated helicase/endonuclease Cas3
SEED: CRISPR-associated helicase Cas3

Rank	Hit	Name	Description	Conserved?	Cofitness
1	LRK54_RS09900		type I-U CRISPR-associated RAMP protein Csb1/Cas7u	no	0.46
2	LRK54_RS13290		PEP-CTERM sorting domain-containing protein	no	0.40
3	LRK54_RS09885		hypothetical protein	no	0.39
4	LRK54_RS12855		PTS fructose transporter subunit IIA	no	0.38
5	LRK54_RS01015		class III poly(R)-hydroxyalkanoic acid synthase subunit PhaC	no	0.37
6	LRK54_RS04340		ribosomal protein S18-alanine N-acetyltransferase	no	0.36
7	LRK54_RS09895		type I-U CRISPR-associated protein Csb2	no	0.36
8	LRK54_RS08200		nucleotidyltransferase domain-containing protein	no	0.36
9	LRK54_RS01020		pha synthase subunit protein	no	0.36
10	LRK54_RS16955		translation elongation factor 4	no	0.35
11	LRK54_RS02415		N-acetylornithine carbamoyltransferase	no	0.35
12	LRK54_RS05740		phosphoglycerate kinase	no	0.34
13	LRK54_RS11735		radical SAM family heme chaperone HemW	no	0.34
14	LRK54_RS08910		hypothetical protein	no	0.34
15	LRK54_RS10465		M61 family metallopeptidase	no	0.34
16	LRK54_RS06795		type II 3-dehydroquinate dehydratase	no	0.34
17	LRK54_RS05845		homogentisate 1,2-dioxygenase	no	0.33
18	LRK54_RS16655		protein-L-isoaspartate(D-aspartate) O-methyltransferase	no	0.33
19	LRK54_RS03405		ribonuclease G	no	0.33
20	LRK54_RS03745		NAD(P)H:quinone oxidoreductase	no	0.33

Or look for negative cofitness