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Cofit
Top cofit genes for LRK54_RS09410 from
Rhodanobacter denitrificans FW104-10B01
IS3 family transposase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
LRK54
_RS06385
Atxe2 family lasso peptide isopeptidase
no
0.28
2
LRK54
_RS16540
penicillin acylase family protein
no
0.28
3
LRK54
_RS10125
16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
no
0.26
4
LRK54
_RS07390
hydantoinase B/oxoprolinase family protein
no
0.26
5
LRK54
_RS09470
Atxe2 family lasso peptide isopeptidase
no
0.25
6
LRK54
_RS08880
hypothetical protein
no
0.25
7
LRK54
_RS12040
TonB-dependent receptor
no
0.24
8
LRK54
_RS03795
thioesterase family protein
no
0.24
9
LRK54
_RS09390
sigma-70 family RNA polymerase sigma factor
no
0.24
10
LRK54
_RS17720
NADH dehydrogenase
no
0.23
11
LRK54
_RS12705
insulinase family protein
no
0.23
12
LRK54
_RS07405
LysR family transcriptional regulator
no
0.23
13
LRK54
_RS17700
hypothetical protein
no
0.23
14
LRK54
_RS03760
DUF2321 domain-containing protein
no
0.22
15
LRK54
_RS13300
hypothetical protein
no
0.22
16
LRK54
_RS17725
nickel-dependent hydrogenase large subunit
no
0.22
17
LRK54
_RS10405
hypothetical protein
no
0.22
18
LRK54
_RS03995
prolyl oligopeptidase family serine peptidase
no
0.22
19
LRK54
_RS14410
DUF190 domain-containing protein
no
0.21
20
LRK54
_RS01440
phosphatase PAP2 family protein
no
0.21
Or look for
negative cofitness