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Cofit
Protein
Homologs
Top cofit genes for LRK54_RS08720 from
Rhodanobacter denitrificans FW104-10B01
YafY family transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
LRK54
_RS06840
DNA polymerase I
no
0.55
2
LRK54
_RS00910
siroheme synthase CysG
0.74
0.51
3
LRK54
_RS10965
FAD-dependent oxidoreductase
0.76
0.50
4
LRK54
_RS08625
exodeoxyribonuclease III
no
0.50
5
LRK54
_RS10960
glutamate synthase large subunit
0.60
0.49
6
LRK54
_RS04765
LysR substrate-binding domain-containing protein
no
0.48
7
LRK54
_RS02370
glutamate-5-semialdehyde dehydrogenase
no
0.48
8
LRK54
_RS05305
cystathionine gamma-synthase
0.76
0.47
9
LRK54
_RS00915
LysR substrate-binding domain-containing protein
0.75
0.47
10
LRK54
_RS12710
DNA starvation/stationary phase protection protein
no
0.47
11
LRK54
_RS05310
homoserine O-succinyltransferase
0.74
0.47
12
LRK54
_RS12030
methylenetetrahydrofolate reductase [NAD(P)H]
0.78
0.47
13
LRK54
_RS08320
phenylalanine 4-monooxygenase
no
0.45
14
LRK54
_RS11670
5-formyltetrahydrofolate cyclo-ligase
0.70
0.44
15
LRK54
_RS04260
pyrroline-5-carboxylate reductase
no
0.43
16
LRK54
_RS10940
uracil-DNA glycosylase
no
0.42
17
LRK54
_RS10340
branched-chain amino acid transaminase
no
0.42
18
LRK54
_RS10335
3-isopropylmalate dehydratase large subunit
0.75
0.42
19
LRK54
_RS10325
3-isopropylmalate dehydrogenase
0.74
0.42
20
LRK54
_RS10310
biosynthetic-type acetolactate synthase large subunit
0.73
0.42
Or look for
negative cofitness