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Cofit
Protein
Homologs
Top cofit genes for LRK54_RS05610 from
Rhodanobacter denitrificans FW104-10B01
GtrA family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
LRK54
_RS14695
rhomboid family intramembrane serine protease
no
0.84
2
LRK54
_RS01410
ABC transporter ATP-binding protein/permease
no
0.83
3
LRK54
_RS03895
lipopolysaccharide biosynthesis protein
no
0.83
4
LRK54
_RS06755
LTA synthase family protein
no
0.83
5
LRK54
_RS05615
hypothetical protein
no
0.83
6
LRK54
_RS06610
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
no
0.82
7
LRK54
_RS00620
FtsH protease activity modulator HflK
no
0.82
8
LRK54
_RS10950
S41 family peptidase
no
0.81
9
LRK54
_RS06470
carboxy terminal-processing peptidase
no
0.81
10
LRK54
_RS15935
rRNA pseudouridine synthase
no
0.81
11
LRK54
_RS00615
protease modulator HflC
no
0.81
12
LRK54
_RS06885
rhodanese-like domain-containing protein
no
0.81
13
LRK54
_RS16660
VTT domain-containing protein
0.44
0.80
14
LRK54
_RS03925
glycosyltransferase family 4 protein
no
0.80
15
LRK54
_RS12190
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
no
0.80
16
LRK54
_RS10185
RDD family protein
no
0.80
17
LRK54
_RS16665
peptidoglycan DD-metalloendopeptidase family protein
no
0.79
18
LRK54
_RS03110
nucleotidyltransferase family protein
no
0.79
19
LRK54
_RS12590
molybdopterin-dependent oxidoreductase
no
0.79
20
LRK54
_RS12670
glycosyltransferase
no
0.79
Or look for
negative cofitness