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Cofit
Protein
Homologs
Top cofit genes for LRK54_RS03895 from
Rhodanobacter denitrificans FW104-10B01
lipopolysaccharide biosynthesis protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
LRK54
_RS05615
hypothetical protein
no
0.89
2
LRK54
_RS14695
rhomboid family intramembrane serine protease
no
0.86
3
LRK54
_RS12590
molybdopterin-dependent oxidoreductase
no
0.85
4
LRK54
_RS03925
glycosyltransferase family 4 protein
no
0.85
5
LRK54
_RS10950
S41 family peptidase
no
0.84
6
LRK54
_RS06610
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
no
0.84
7
LRK54
_RS16665
peptidoglycan DD-metalloendopeptidase family protein
no
0.84
8
LRK54
_RS05610
GtrA family protein
no
0.83
9
LRK54
_RS15935
rRNA pseudouridine synthase
no
0.83
10
LRK54
_RS10185
RDD family protein
no
0.83
11
LRK54
_RS12305
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
no
0.82
12
LRK54
_RS01410
ABC transporter ATP-binding protein/permease
no
0.82
13
LRK54
_RS12190
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
no
0.82
14
LRK54
_RS06885
rhodanese-like domain-containing protein
no
0.82
15
LRK54
_RS16660
VTT domain-containing protein
no
0.82
16
LRK54
_RS03710
tetratricopeptide repeat protein
no
0.82
17
LRK54
_RS06495
septal ring lytic transglycosylase RlpA family protein
no
0.81
18
LRK54
_RS08585
RimK family alpha-L-glutamate ligase
no
0.81
19
LRK54
_RS00620
FtsH protease activity modulator HflK
no
0.81
20
LRK54
_RS03930
glycosyltransferase family 2 protein
no
0.81
Or look for
negative cofitness