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Cofit
Protein
Homologs
Top cofit genes for LRK54_RS03875 from
Rhodanobacter denitrificans FW104-10B01
pilin
KEGG: type IV pilus assembly protein PilA
Rank
Hit
Name
Description
Conserved?
Cofitness
1
LRK54
_RS06720
glycosyltransferase
no
0.50
2
LRK54
_RS13800
DUF1631 domain-containing protein
0.39
0.48
3
LRK54
_RS04180
methyl-accepting chemotaxis protein
no
0.46
4
LRK54
_RS16965
DUF4845 domain-containing protein
no
0.44
5
LRK54
_RS03915
glycosyltransferase family 2 protein
no
0.40
6
LRK54
_RS16870
phosphoenolpyruvate synthase
no
0.39
7
LRK54
_RS05765
fructose-bisphosphate aldolase class I
no
0.39
8
LRK54
_RS12710
DNA starvation/stationary phase protection protein
0.42
0.37
9
LRK54
_RS04170
chemotaxis protein CheB
no
0.37
10
LRK54
_RS10350
hypothetical protein
no
0.37
11
LRK54
_RS03925
glycosyltransferase family 4 protein
no
0.37
12
LRK54
_RS04005
TonB-dependent receptor
no
0.36
13
LRK54
_RS10865
DEAD/DEAH box helicase
no
0.35
14
LRK54
_RS02415
N-acetylornithine carbamoyltransferase
no
0.35
15
LRK54
_RS00910
siroheme synthase CysG
no
0.34
16
LRK54
_RS02385
N-acetyl-gamma-glutamyl-phosphate reductase
0.33
0.34
17
LRK54
_RS11415
anthranilate synthase component I
no
0.33
18
LRK54
_RS10335
3-isopropylmalate dehydratase large subunit
no
0.33
19
LRK54
_RS10340
branched-chain amino acid transaminase
no
0.33
20
LRK54
_RS10345
2-isopropylmalate synthase
no
0.33
Or look for
negative cofitness