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Cofit
Protein
Homologs
Top cofit genes for LRK54_RS03390 from
Rhodanobacter denitrificans FW104-10B01
cytochrome C
Rank
Hit
Name
Description
Conserved?
Cofitness
1
LRK54
_RS03170
uracil phosphoribosyltransferase
no
0.69
2
LRK54
_RS12135
5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase
no
0.66
3
LRK54
_RS03435
hypothetical protein
no
0.65
4
LRK54
_RS17110
serine hydrolase
no
0.62
5
LRK54
_RS03420
cytochrome c
no
0.62
6
LRK54
_RS03340
YajD family HNH nuclease
no
0.62
7
LRK54
_RS06635
RcnB family protein
no
0.60
8
LRK54
_RS03325
hypothetical protein
no
0.60
9
LRK54
_RS00985
Hsp20/alpha crystallin family protein
no
0.60
10
LRK54
_RS17100
alpha/beta hydrolase
no
0.56
11
LRK54
_RS17145
Ig-like domain-containing protein
no
0.56
12
LRK54
_RS18140
phospholipase D family protein
no
0.56
13
LRK54
_RS00665
rRNA pseudouridine synthase
no
0.55
14
LRK54
_RS09315
hypothetical protein
no
0.55
15
LRK54
_RS02935
M1 family metallopeptidase
no
0.55
16
LRK54
_RS03330
TlpA family protein disulfide reductase
no
0.54
17
LRK54
_RS04160
16S rRNA (uracil(1498)-N(3))-methyltransferase
no
0.54
18
LRK54
_RS18070
FAD-binding oxidoreductase
0.71
0.53
19
LRK54
_RS00570
S8 family serine peptidase
no
0.52
20
LRK54
_RS00715
propionate--CoA ligase
no
0.52
Or look for
negative cofitness