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Cofit
Protein
Homologs
Top cofit genes for IAI47_17560 from
Pantoea sp. MT58
ROK family transcriptional regulator
SEED: ROK
Rank
Hit
Name
Description
Conserved?
Cofitness
1
IAI47
_16825
ribonuclease E inhibitor RraB
no
0.39
2
IAI47
_08300
chemotaxis protein CheA
no
0.34
3
IAI47
_12120
flagellar hook-associated protein FlgK
no
0.33
4
IAI47
_02040
peptidylprolyl isomerase
no
0.32
5
IAI47
_08135
flagellar export chaperone FliS
no
0.31
6
IAI47
_08145
flagellin FliC
no
0.31
7
IAI47
_12115
flagellar hook-associated protein FlgL
no
0.31
8
IAI47
_08325
protein-glutamate O-methyltransferase CheR
no
0.30
9
IAI47
_08140
flagellar filament capping protein FliD
no
0.29
10
IAI47
_12155
flagellar hook assembly protein FlgD
no
0.29
11
IAI47
_09345
LysR family transcriptional regulator
no
0.28
12
IAI47
_12140
flagellar basal-body rod protein FlgG
no
0.28
13
IAI47
_08285
flagellar transcriptional regulator FlhC
no
0.28
14
IAI47
_09210
23S rRNA pseudouridine(2605) synthase RluB
no
0.27
15
IAI47
_08160
RNA polymerase sigma factor FliA
no
0.27
16
IAI47
_10435
transcription modulator YdgT
no
0.27
17
IAI47
_01600
sn-glycerol-3-phosphate ABC transporter permease UgpE
no
0.27
18
IAI47
_07975
flagellar biosynthesis protein FliQ
no
0.27
19
IAI47
_05000
Fe-S cluster assembly transcriptional regulator IscR
no
0.27
20
IAI47
_10275
hypothetical protein
no
0.26
Or look for
negative cofitness