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Cofit
Top cofit genes for IAI47_16625 from
Pantoea sp. MT58
IS3 family transposase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
IAI47
_06790
alkyl hydroperoxide reductase subunit C
no
0.45
2
IAI47
_19875
TetR/AcrR family transcriptional regulator
no
0.44
3
IAI47
_07540
hypothetical protein
no
0.44
4
IAI47
_20715
helix-turn-helix transcriptional regulator
no
0.43
5
IAI47
_10680
TetR/AcrR family transcriptional regulator
no
0.42
6
IAI47
_05775
type II toxin-antitoxin system MqsA family antitoxin
no
0.41
7
IAI47
_05515
formate/nitrite transporter family protein
no
0.40
8
IAI47
_08655
transcriptional regulator BetI
no
0.40
9
IAI47
_13185
outer membrane protein OmpX
no
0.40
10
IAI47
_15080
cold-shock protein
no
0.40
11
IAI47
_10990
DUF481 domain-containing protein
no
0.39
12
IAI47
_20505
type II toxin-antitoxin system PrlF family antitoxin
no
0.39
13
IAI47
_05490
tRNA-Val
no
0.39
14
IAI47
_14020
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
no
0.38
15
IAI47
_19710
helix-turn-helix transcriptional regulator
no
0.38
16
IAI47
_17565
N-acetylglucosamine kinase
no
0.38
17
IAI47
_09720
TetR/AcrR family transcriptional regulator
no
0.38
18
IAI47
_04060
YqcC family protein
no
0.38
19
IAI47
_09860
RES family NAD+ phosphorylase
no
0.38
20
IAI47
_03000
tail fiber assembly protein
no
0.37
Or look for
negative cofitness