Top cofit genes for IAI47_14515 from Pantoea sp. MT58

multidrug efflux RND transporter permease subunit
SEED: RND efflux system, inner membrane transporter CmeB
KEGG: hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family

Rank Hit Name Description Conserved? Cofitness  
1 IAI47_14510 efflux RND transporter periplasmic adaptor subunit 0.99 0.90
2 IAI47_02765 metalloprotease PmbA 0.81 0.57
3 IAI47_07965 transcriptional regulator RcsA no 0.56
4 IAI47_03750 Xaa-Pro aminopeptidase 0.41 0.55
5 IAI47_02465 metalloprotease TldD 0.86 0.55
6 IAI47_14835 branched-chain amino acid transporter carrier protein BrnQ 0.33 0.55
7 IAI47_07910 DNA (cytosine-5-)-methyltransferase 0.89 0.53
8 IAI47_06925 undecaprenyl-phosphate galactose phosphotransferase WbaP no 0.53
9 IAI47_09265 LapA family protein no 0.53
10 IAI47_12950 ATP-dependent Clp protease adapter ClpS 0.24 0.52
11 IAI47_02835 DnaA initiator-associating protein DiaA 0.41 0.51
12 IAI47_18510 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.22 0.51
13 IAI47_01120 manganese efflux pump MntP no 0.51
14 IAI47_06475 transcriptional regulator RcsB no 0.51
15 IAI47_18505 UDP-N-acetyl-D-mannosamine dehydrogenase 0.48 0.50
16 IAI47_17985 YjbH domain-containing protein 0.61 0.50
17 IAI47_12685 ABC transporter ATP-binding protein 0.87 0.50
18 IAI47_11755 alpha,alpha-trehalase TreA 0.33 0.48
19 IAI47_17130 phospholipid-binding protein MlaC 0.58 0.48
20 IAI47_11975 transcription-repair coupling factor 0.57 0.48

Or look for negative cofitness