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Cofit
Top cofit genes for IAI47_11440 from
Pantoea sp. MT58
RHS repeat protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
IAI47
_13355
DMT family transporter
no
0.54
2
IAI47
_06425
GNAT family N-acetyltransferase
no
0.53
3
IAI47
_04465
MFS transporter
no
0.51
4
IAI47
_07335
hypothetical protein
no
0.50
5
IAI47
_07330
hypothetical protein
no
0.50
6
IAI47
_15795
IS481 family transposase
no
0.50
7
IAI47
_15670
acyltransferase family protein
no
0.50
8
IAI47
_11530
PAAR domain-containing protein
no
0.50
9
IAI47
_09920
FUSC family protein
no
0.50
10
IAI47
_05085
glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase
no
0.49
11
IAI47
_05660
serine protease
no
0.48
12
IAI47
_14230
DotU family type IV/VI secretion system protein
no
0.48
13
IAI47
_11410
hypothetical protein
no
0.48
14
IAI47
_03125
glutathionylspermidine synthase family protein
no
0.48
15
IAI47
_16100
PhoX family phosphatase
no
0.47
16
IAI47
_02990
hypothetical protein
no
0.47
17
IAI47
_02255
DUF1992 domain-containing protein
no
0.46
18
IAI47
_05410
response regulator transcription factor
no
0.46
19
IAI47
_15445
lysine decarboxylase LdcC
no
0.46
20
IAI47
_15430
cytochrome c
no
0.45
Or look for
negative cofitness