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  • Top cofit genes for IAI47_08405 from Pantoea sp. MT58

    tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB
    SEED: tRNA (5-methoxyuridine) 34 synthase
    KEGG: tRNA (mo5U34)-methyltransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 IAI47_08410 carboxy-S-adenosyl-L-methionine synthase CmoA 0.95 0.80
    2 IAI47_04605 magnesium-translocating P-type ATPase 0.51 0.70
    3 IAI47_13795 5-oxoprolinase subunit PxpA 0.39 0.65
    4 IAI47_03905 TerC family protein 0.47 0.64
    5 IAI47_11935 two-component system sensor histidine kinase PhoQ 0.61 0.59
    6 IAI47_06055 tRNA-Arg no 0.59
    7 IAI47_13340 isopentenyl-diphosphate Delta-isomerase no 0.58
    8 IAI47_11930 two-component system response regulator PhoP 0.56 0.58
    9 IAI47_06355 transcriptional regulator LrhA no 0.54
    10 IAI47_05510 putative DNA-binding transcriptional regulator no 0.54
    11 IAI47_07965 transcriptional regulator RcsA 0.35 0.53
    12 IAI47_20755 methionine synthase no 0.52
    13 IAI47_13545 6-phosphogluconolactonase 0.27 0.52
    14 IAI47_01100 malate dehydrogenase (quinone) no 0.51
    15 IAI47_13900 asparagine synthase B 0.33 0.51
    16 IAI47_21635 hypothetical protein no 0.51
    17 IAI47_04360 HlyC/CorC family transporter 0.84 0.51
    18 IAI47_05395 sulfate/thiosulfate ABC transporter permease CysW 0.37 0.51
    19 IAI47_08435 YebC/PmpR family DNA-binding transcriptional regulator 0.55 0.51
    20 IAI47_06790 alkyl hydroperoxide reductase subunit C 0.66 0.51

    Or look for negative cofitness